cytocalc.csmparser module¶ class cytocalc.csmparser.CSMParser[source]¶ Bases: object Parses the cytosim trajectory file for a given frame Returns an extended DataFrame object (CSMFrame) parse_frame(frame_data)[source]¶ Parses the cytosim trajectory file parse_frameFile(filename)[source]¶ parse_simFile(filename)[source]¶ Parses cytosim trajectory file generated using report Returns a CSMSimulation class cytocalc.csmparser.CYMParser[source]¶ Bases: object Deprecated A Class for parsin the configuration file (configuration.cym) Returns a dictionary that can be used in a CSMSimulation parse_config()[source]¶ Parses configuration file using regex to get params